Package index • hacksig

Score computation

hack_sig(): Score samples by gene signatures

hack_estimate(): Hack the ESTIMATE scores

hack_cinsarc(): Hack the CINSARC classification

hack_immunophenoscore(): Hack the Immunophenoscore

stratify_sig(): Stratify samples into classes

Utilities

check_sig(): Check signatures feasibility

get_sig_info(): Display available gene signatures

get_sig_genes(): Get signature gene identifiers

Example data

test_expr: A toy gene expression matrix